PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon20472681_s.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family FAR1
Protein Properties Length: 140aa    MW: 15629.5 Da    PI: 9.7036
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon20472681_s.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.81.4e-07531371088
                              FAR1  10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkle. 82 
                                         +  ++ +skk   +g  tk  ++C ++g + + ++    ++ ++r++++ +tgC+ +++  ++ dgkwe+ +   
  FANhyb_icon20472681_s.1.g00001.1  53 HRYAFSIGRSKKI-SSGFRTKVLYNCDRYGPPPPVNQPqssSQARKRKTSSRKTGCQFSVVAIEQLDGKWELRHRPg 128
                                       4444444444444.45778999********9876655545467788899999******99998888*****987543 PP

                              FAR1  83 ...leHnHe 88 
                                            HnH+
  FANhyb_icon20472681_s.1.g00001.1 129 tenCSHNHP 137
                                       333789996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.9E-557137IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MSIQAQLSPL VSQSSESLIE YATTTTSMPL PPEAVYSSQE ELYSAIQSWA AQHRYAFSIG  60
RSKKISSGFR TKVLYNCDRY GPPPPVNQPQ SSSQARKRKT SSRKTGCQFS VVAIEQLDGK  120
WELRHRPGTE NCSHNHPPSQ